STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_364BQ2448_364 protein. (287 aa)    
Predicted Functional Partners:
BQ2448_797
BQ2448_797 protein.
   
 
 0.951
BQ2448_7715
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
  
 0.915
BQ2448_4801
BQ2448_4801 protein.
   
 
 0.911
BQ2448_7320
BQ2448_7320 protein.
   
 
 0.907
BQ2448_4914
BQ2448_4914 protein.
   
   0.839
BQ2448_5664
BQ2448_5664 protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.832
BQ2448_5910
BQ2448_5910 protein.
   
 
 0.822
BQ2448_2813
BQ2448_2813 protein.
   
 
 0.813
BQ2448_1225
BQ2448_1225 protein; Belongs to the universal ribosomal protein uL16 family.
   
   0.791
BQ2448_4223
BQ2448_4223 protein.
   
   0.791
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.