STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5059BQ2448_5059 protein. (705 aa)    
Predicted Functional Partners:
BQ2448_5765
BQ2448_5765 protein.
   
 0.988
BQ2448_5926
BQ2448_5926 protein.
   
 0.982
BQ2448_4491
BQ2448_4491 protein.
    
 0.970
BQ2448_6683
BQ2448_6683 protein.
    
 0.969
BQ2448_7405
Serine/threonine-protein phosphatase.
    
 0.968
BQ2448_3663
BQ2448_3663 protein.
   
 0.960
BQ2448_2559
BQ2448_2559 protein.
   
 
 0.958
BQ2448_480
BQ2448_480 protein; Belongs to the heat shock protein 70 family.
 
 
 0.927
BQ2448_4502
BQ2448_4502 protein.
   
 0.927
BQ2448_7658
BQ2448_7658 protein.
   
 0.927
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.