STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (758 aa)    
Predicted Functional Partners:
BQ2448_5454
BQ2448_5454 protein.
    
 
 0.920
BQ2448_5068
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.900
BQ2448_2577
BQ2448_2577 protein.
    
 
 0.859
BQ2448_6798
BQ2448_6798 protein.
    
 
 0.813
BQ2448_2736
BQ2448_2736 protein; Belongs to the RecA family.
   
 
 0.759
BQ2448_7732
BQ2448_7732 protein.
   
 
 0.755
BQ2448_5331
BQ2448_5331 protein.
    
 
 0.732
BQ2448_6993
BQ2448_6993 protein.
   
 
 0.711
BQ2448_1298
BQ2448_1298 protein.
    
 
 0.680
BQ2448_884
BQ2448_884 protein.
    
 
 0.678
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.