STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_385BQ2448_385 protein. (209 aa)    
Predicted Functional Partners:
BQ2448_6951
BQ2448_6951 protein.
    
 0.956
BQ2448_5526
BQ2448_5526 protein.
   
 0.943
BQ2448_3303
BQ2448_3303 protein.
   
 0.943
BQ2448_461
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.937
BQ2448_7307
BQ2448_7307 protein.
   
 
 0.933
BQ2448_1616
BQ2448_1616 protein.
    
 
 0.838
BQ2448_7072
BQ2448_7072 protein.
    
 
 0.831
BQ2448_1392
Serine/threonine-protein phosphatase.
    
 
 0.426
BQ2448_2553
BQ2448_2553 protein.
 
 
    0.415
BQ2448_5903
BQ2448_5903 protein.
      
 0.410
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.