STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1161BQ2448_1161 protein. (541 aa)    
Predicted Functional Partners:
BQ2448_2242
BQ2448_2242 protein; Belongs to the calmodulin family.
   
 0.723
BQ2448_8021
BQ2448_8021 protein.
   
 0.723
BQ2448_2556
BQ2448_2556 protein.
    
 0.632
BQ2448_5330
BQ2448_5330 protein.
   
 0.615
BQ2448_3310
BQ2448_3310 protein.
   
 0.608
BQ2448_3913
BQ2448_3913 protein.
   
 0.607
BQ2448_462
BQ2448_462 protein.
   
 0.590
BQ2448_8134
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
   
 0.581
BQ2448_2275
BQ2448_2275 protein.
   
 0.553
BQ2448_454
BQ2448_454 protein.
   
 0.553
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.