STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_5487BQ2448_5487 protein. (1116 aa)    
Predicted Functional Partners:
BQ2448_6251
Histone H2A; Belongs to the histone H2A family.
    
 
 0.755
BQ2448_1196
BQ2448_1196 protein.
   
 
 0.743
BQ2448_1195
BQ2448_1195 protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.743
BQ2448_3147
BQ2448_3147 protein.
    
 
 0.737
BQ2448_2923
BQ2448_2923 protein.
   
 
  0.715
BQ2448_4370
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.698
BQ2448_1573
BQ2448_1573 protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.668
BQ2448_6666
BQ2448_6666 protein.
    
 
 0.649
BQ2448_794
BQ2448_794 protein.
    
 
 0.648
BQ2448_5878
BQ2448_5878 protein.
   
 
 0.641
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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