STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_49BQ2448_49 protein. (822 aa)    
Predicted Functional Partners:
BQ2448_4795
BQ2448_4795 protein.
   
 0.952
BQ2448_4815
BQ2448_4815 protein.
    
 0.950
BQ2448_7738
BQ2448_7738 protein.
    
 0.938
BQ2448_4697
BQ2448_4697 protein.
   
 
 0.849
BQ2448_7997
BQ2448_7997 protein.
   
 
 0.777
BQ2448_3021
BQ2448_3021 protein.
    
 
 0.662
BQ2448_4536
BQ2448_4536 protein; Belongs to the actin family.
    
 
 0.660
BQ2448_6849
BQ2448_6849 protein.
    
 
 0.646
BQ2448_1651
BQ2448_1651 protein.
    
 
 0.641
BQ2448_6769
BQ2448_6769 protein.
    
 
 0.641
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.