STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1193BQ2448_1193 protein. (353 aa)    
Predicted Functional Partners:
BQ2448_6196
BQ2448_6196 protein.
   
 0.899
BQ2448_6019
BQ2448_6019 protein.
  
 0.888
BQ2448_4537
BQ2448_4537 protein.
   
 0.883
BQ2448_1861
BQ2448_1861 protein.
  
 
 0.871
BQ2448_274
BQ2448_274 protein.
  
 0.828
BQ2448_6825
BQ2448_6825 protein.
   
 0.828
BQ2448_648
BQ2448_648 protein.
  
 0.822
BQ2448_2390
BQ2448_2390 protein.
   
 0.811
BQ2448_5813
BQ2448_5813 protein.
   
 0.781
BQ2448_3729
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
     
 0.746
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.