STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2073BQ2448_2073 protein. (341 aa)    
Predicted Functional Partners:
BQ2448_1823
BQ2448_1823 protein.
   
 0.876
BQ2448_138
BQ2448_138 protein.
   
 0.862
BQ2448_7405
Serine/threonine-protein phosphatase.
   
 0.851
BQ2448_5984
BQ2448_5984 protein.
 
      0.800
BQ2448_5827
BQ2448_5827 protein.
   
 0.778
BQ2448_6027
BQ2448_6027 protein.
   
 0.778
BQ2448_5059
BQ2448_5059 protein.
   
 0.778
BQ2448_2559
BQ2448_2559 protein.
   
 
 0.496
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.