STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2154BQ2448_2154 protein. (892 aa)    
Predicted Functional Partners:
BQ2448_4048
RNA helicase.
  
 
0.977
BQ2448_7567
BQ2448_7567 protein.
  
0.961
BQ2448_3972
BQ2448_3972 protein.
   
 
 0.957
BQ2448_4255
BQ2448_4255 protein.
   
 0.952
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.951
BQ2448_2673
BQ2448_2673 protein.
 
 
   0.950
BQ2448_1821
BQ2448_1821 protein.
  
 
0.947
BQ2448_4781
BQ2448_4781 protein.
   
 0.946
BQ2448_7032
BQ2448_7032 protein.
   
 
 0.937
BQ2448_3430
BQ2448_3430 protein.
   
 0.934
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.