STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2234BQ2448_2234 protein. (307 aa)    
Predicted Functional Partners:
BQ2448_1851
BQ2448_1851 protein.
    
 0.907
BQ2448_1852
BQ2448_1852 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.907
BQ2448_5185
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
 
      0.875
BQ2448_3339
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
 0.860
BQ2448_3252
BQ2448_3252 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.858
BQ2448_768
BQ2448_768 protein.
    
 0.855
BQ2448_8085
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
 
  
 0.827
BQ2448_7248
BQ2448_7248 protein; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.824
BQ2448_3063
BQ2448_3063 protein.
    
 0.818
BQ2448_2013
BQ2448_2013 protein.
    
0.817
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.