STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_627BQ2448_627 protein. (222 aa)    
Predicted Functional Partners:
BQ2448_4906
BQ2448_4906 protein.
    
 0.793
BQ2448_6462
BQ2448_6462 protein.
    
 0.675
BQ2448_2130
BQ2448_2130 protein.
    
  0.629
BQ2448_479
BQ2448_479 protein.
   
  0.617
BQ2448_2208
BQ2448_2208 protein.
    
 0.617
BQ2448_5690
BQ2448_5690 protein.
    
  0.616
BQ2448_1146
BQ2448_1146 protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.616
BQ2448_646
BQ2448_646 protein.
    
 0.615
BQ2448_4223
BQ2448_4223 protein.
   
  0.615
BQ2448_6941
BQ2448_6941 protein.
   
  0.615
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.