STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3437BQ2448_3437 protein. (695 aa)    
Predicted Functional Partners:
BQ2448_6109
BQ2448_6109 protein.
   
 0.970
BQ2448_4777
BQ2448_4777 protein.
    
 0.952
BQ2448_5710
BQ2448_5710 protein.
   
 0.951
BQ2448_6815
BQ2448_6815 protein.
    
 0.946
BQ2448_4307
BQ2448_4307 protein.
   
  0.943
BQ2448_7217
BQ2448_7217 protein.
    
 0.942
BQ2448_6616
BQ2448_6616 protein.
   
 0.939
BQ2448_1601
BQ2448_1601 protein.
   
 0.938
BQ2448_1505
BQ2448_1505 protein.
   
 0.903
BQ2448_5678
BQ2448_5678 protein.
    
   0.888
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.