STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3068BQ2448_3068 protein. (365 aa)    
Predicted Functional Partners:
BQ2448_4693
BQ2448_4693 protein.
   
 0.987
BQ2448_6728
BQ2448_6728 protein.
    
 0.969
BQ2448_923
BQ2448_923 protein; Belongs to the PI3/PI4-kinase family.
    
 0.940
BQ2448_7966
BQ2448_7966 protein.
   
 
 0.931
BQ2448_1051
BQ2448_1051 protein.
   
 
 0.925
BQ2448_2101
BQ2448_2101 protein.
    
 
 0.922
BQ2448_1313
DNA helicase; Belongs to the MCM family.
   
 
 0.919
BQ2448_5073
DNA helicase; Belongs to the MCM family.
   
 
 0.905
BQ2448_3196
BQ2448_3196 protein.
   
 0.857
BQ2448_2170
BQ2448_2170 protein.
   
 0.834
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.