STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3120BQ2448_3120 protein. (599 aa)    
Predicted Functional Partners:
BQ2448_2396
BQ2448_2396 protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 0.965
BQ2448_1924
BQ2448_1924 protein.
  
 0.824
BQ2448_5228
BQ2448_5228 protein.
    
 0.808
BQ2448_1734
Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.753
BQ2448_6800
BQ2448_6800 protein.
  
 
 0.752
BQ2448_7979
BQ2448_7979 protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.709
BQ2448_1065
BQ2448_1065 protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.701
BQ2448_7963
Arginase; Belongs to the arginase family.
    
 0.694
BQ2448_1913
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
     
 0.687
BQ2448_2091
BQ2448_2091 protein.
    
 0.649
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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