STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1968BQ2448_1968 protein. (1540 aa)    
Predicted Functional Partners:
BQ2448_1194
BQ2448_1194 protein.
   
 0.981
BQ2448_2992
BQ2448_2992 protein.
   
 0.811
BQ2448_8115
3-hydroxy-3-methylglutaryl coenzyme A reductase.
   
  
 0.426
BQ2448_5896
BQ2448_5896 protein.
   
 0.422
BQ2448_5895
BQ2448_5895 protein.
   
 0.422
BQ2448_7065
BQ2448_7065 protein; Belongs to the OSBP family.
   
 0.422
BQ2448_3269
BQ2448_3269 protein; Belongs to the OSBP family.
   
 0.422
BQ2448_7698
BQ2448_7698 protein.
   
 0.422
BQ2448_4335
BQ2448_4335 protein; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
      
 0.404
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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