STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1335BQ2448_1335 protein. (1593 aa)    
Predicted Functional Partners:
BQ2448_4123
BQ2448_4123 protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.663
BQ2448_4555
BQ2448_4555 protein.
    
 
 0.539
BQ2448_2905
BQ2448_2905 protein.
    
 
 0.525
BQ2448_2448
BQ2448_2448 protein.
    
 
 0.483
BQ2448_5778
BQ2448_5778 protein.
    
   0.457
BQ2448_789
BQ2448_789 protein.
    
   0.457
BQ2448_7338
BQ2448_7338 protein.
    
   0.457
BQ2448_5761
BQ2448_5761 protein.
    
 
 0.448
BQ2448_6448
BQ2448_6448 protein.
    
 
 0.432
BQ2448_2901
BQ2448_2901 protein; Belongs to the argonaute family.
    
 
 0.427
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.