STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_4506BQ2448_4506 protein. (154 aa)    
Predicted Functional Partners:
BQ2448_3122
BQ2448_3122 protein; Belongs to the actin family.
    
 0.998
BQ2448_3477
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.994
BQ2448_1914
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.992
BQ2448_5260
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.979
BQ2448_3715
BQ2448_3715 protein.
    
 0.968
BQ2448_4536
BQ2448_4536 protein; Belongs to the actin family.
    
 0.955
BQ2448_3514
BQ2448_3514 protein.
    
 0.820
BQ2448_877
BQ2448_877 protein; Belongs to the actin family.
    
 0.820
BQ2448_2941
Ubiquitin carboxyl-terminal hydrolase.
    
  0.802
BQ2448_3473
BQ2448_3473 protein.
   
 0.795
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.