STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3751BQ2448_3751 protein. (287 aa)    
Predicted Functional Partners:
BQ2448_418
BQ2448_418 protein.
   
   0.635
BQ2448_3462
BQ2448_3462 protein.
    
   0.577
BQ2448_2382
BQ2448_2382 protein.
    
  0.475
BQ2448_902
BQ2448_902 protein.
    
  0.475
BQ2448_864
BQ2448_864 protein.
    
  0.475
BQ2448_3158
BQ2448_3158 protein.
    
  0.475
BQ2448_1565
BQ2448_1565 protein.
    
  0.475
BQ2448_3157
BQ2448_3157 protein.
    
  0.475
BQ2448_1512
BQ2448_1512 protein.
    
  0.475
BQ2448_7169
BQ2448_7169 protein.
    
  0.475
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.