STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1805BQ2448_1805 protein. (381 aa)    
Predicted Functional Partners:
BQ2448_4906
BQ2448_4906 protein.
    
 0.959
BQ2448_7554
BQ2448_7554 protein.
   
 0.932
BQ2448_6279
BQ2448_6279 protein.
   
 0.929
BQ2448_8041
BQ2448_8041 protein.
    
 0.902
BQ2448_2417
BQ2448_2417 protein.
  
 
 0.897
BQ2448_5395
Aspartate aminotransferase.
    
 0.875
BQ2448_4103
BQ2448_4103 protein.
    
 0.873
BQ2448_2618
BQ2448_2618 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
  
 
 0.868
BQ2448_1816
BQ2448_1816 protein.
    
 0.867
BQ2448_3460
Aspartate aminotransferase.
    
 0.860
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.