STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2496Glutamate decarboxylase; Belongs to the group II decarboxylase family. (939 aa)    
Predicted Functional Partners:
BQ2448_2820
BQ2448_2820 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.947
BQ2448_7162
BQ2448_7162 protein.
  
 
 0.924
BQ2448_6124
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.919
BQ2448_3940
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.900
BQ2448_6596
BQ2448_6596 protein; Belongs to the glutamine synthetase family.
    
 0.895
BQ2448_3722
Glutamine synthetase.
    
 0.873
BQ2448_1176
BQ2448_1176 protein.
     
 0.868
BQ2448_1770
BQ2448_1770 protein.
    
 0.847
BQ2448_5066
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.846
BQ2448_6444
BQ2448_6444 protein; Belongs to the aldehyde dehydrogenase family.
   
 0.829
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.