STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1797BQ2448_1797 protein. (1599 aa)    
Predicted Functional Partners:
BQ2448_6000
BQ2448_6000 protein; Belongs to the peptidase C19 family.
    
  0.680
BQ2448_4746
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.659
BQ2448_882
BQ2448_882 protein.
    
 0.646
BQ2448_7764
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.637
BQ2448_2599
BQ2448_2599 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.636
BQ2448_2536
BQ2448_2536 protein; Belongs to the adaptor complexes medium subunit family.
    
  0.619
BQ2448_456
BQ2448_456 protein; Belongs to the AAA ATPase family.
    
 0.618
BQ2448_5269
BQ2448_5269 protein.
    
 0.618
BQ2448_4047
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.613
BQ2448_917
BQ2448_917 protein.
    
  0.608
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.