STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1847BQ2448_1847 protein. (527 aa)    
Predicted Functional Partners:
BQ2448_7345
BQ2448_7345 protein.
   
 0.999
BQ2448_6016
BQ2448_6016 protein.
   
 0.998
BQ2448_1859
BQ2448_1859 protein.
    
 0.998
BQ2448_736
BQ2448_736 protein.
    
 0.997
BQ2448_3966
BQ2448_3966 protein.
    
 0.997
BQ2448_418
BQ2448_418 protein.
    
 0.992
BQ2448_5710
BQ2448_5710 protein.
   
 
 0.991
BQ2448_5447
BQ2448_5447 protein.
   
 
 0.991
BQ2448_6109
BQ2448_6109 protein.
   
 
 0.991
BQ2448_8088
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.991
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.