STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2556BQ2448_2556 protein. (651 aa)    
Predicted Functional Partners:
BQ2448_169
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.975
BQ2448_5926
BQ2448_5926 protein.
   
 0.969
BQ2448_419
BQ2448_419 protein.
    
 0.969
BQ2448_7321
BQ2448_7321 protein.
    
 0.969
BQ2448_456
BQ2448_456 protein; Belongs to the AAA ATPase family.
    
 0.965
BQ2448_5269
BQ2448_5269 protein.
    
 0.965
BQ2448_240
BQ2448_240 protein.
    
 0.959
BQ2448_5827
BQ2448_5827 protein.
    
 0.843
BQ2448_6027
BQ2448_6027 protein.
    
 0.843
BQ2448_5059
BQ2448_5059 protein.
    
 0.843
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.