STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1160BQ2448_1160 protein. (873 aa)    
Predicted Functional Partners:
BQ2448_6188
BQ2448_6188 protein.
   
 0.999
BQ2448_5100
BQ2448_5100 protein.
    
 0.998
BQ2448_2160
BQ2448_2160 protein.
    
 0.998
BQ2448_580
BQ2448_580 protein.
    
 0.998
BQ2448_3312
BQ2448_3312 protein.
    
 0.998
BQ2448_3319
BQ2448_3319 protein.
    
 0.998
BQ2448_2078
BQ2448_2078 protein.
   
 0.998
BQ2448_4774
BQ2448_4774 protein.
    
 0.998
BQ2448_3147
BQ2448_3147 protein.
    
 0.998
BQ2448_6859
BQ2448_6859 protein.
    
 0.998
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.