STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3297BQ2448_3297 protein. (564 aa)    
Predicted Functional Partners:
BQ2448_1708
BQ2448_1708 protein.
   
 0.920
BQ2448_782
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 0.832
BQ2448_5515
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
     
 0.770
BQ2448_6202
BQ2448_6202 protein.
     
 0.770
BQ2448_2005
BQ2448_2005 protein.
   
 0.726
BQ2448_1426
BQ2448_1426 protein.
   
 0.726
BQ2448_5878
BQ2448_5878 protein.
    
 
 0.604
BQ2448_5277
BQ2448_5277 protein; Belongs to the SKP1 family.
    
 
 0.571
BQ2448_4687
BQ2448_4687 protein.
    
 
 0.571
BQ2448_566
Elongation of fatty acids protein.
    
 0.554
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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