STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_1340BQ2448_1340 protein. (226 aa)    
Predicted Functional Partners:
BQ2448_4906
BQ2448_4906 protein.
  
  0.846
BQ2448_1710
BQ2448_1710 protein.
    
 0.743
BQ2448_5860
BQ2448_5860 protein.
    
 0.742
BQ2448_3147
BQ2448_3147 protein.
    
 0.742
BQ2448_4134
BQ2448_4134 protein.
    
 0.740
BQ2448_4236
BQ2448_4236 protein.
    
 0.707
BQ2448_5911
BQ2448_5911 protein.
    
 0.697
BQ2448_789
BQ2448_789 protein.
   
 
  0.662
BQ2448_691
BQ2448_691 protein.
    
  0.650
BQ2448_1232
BQ2448_1232 protein; Belongs to the cyclin family.
    
  0.649
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.