STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3696BQ2448_3696 protein. (287 aa)    
Predicted Functional Partners:
BQ2448_648
BQ2448_648 protein.
  
 0.652
BQ2448_7508
BQ2448_7508 protein; Belongs to the dihydrofolate reductase family.
   
 
 0.639
BQ2448_1236
BQ2448_1236 protein.
   
 0.633
BQ2448_2066
BQ2448_2066 protein.
   
 0.633
BQ2448_5740
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
  0.629
BQ2448_3542
BQ2448_3542 protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.613
BQ2448_6854
BQ2448_6854 protein.
    
  0.603
BQ2448_1689
BQ2448_1689 protein.
   
0.602
BQ2448_180
BQ2448_180 protein.
   
 0.584
BQ2448_1240
BQ2448_1240 protein.
    
 0.570
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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