STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3716BQ2448_3716 protein. (754 aa)    
Predicted Functional Partners:
BQ2448_4906
BQ2448_4906 protein.
    
 0.799
BQ2448_6462
BQ2448_6462 protein.
    
 0.675
BQ2448_4329
BQ2448_4329 protein.
    
 0.674
BQ2448_3715
BQ2448_3715 protein.
 
  
  0.657
BQ2448_4137
BQ2448_4137 protein.
    
 0.652
BQ2448_3477
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.649
BQ2448_5758
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.638
BQ2448_3163
BQ2448_3163 protein.
   
  0.632
BQ2448_2130
BQ2448_2130 protein.
    
  0.629
BQ2448_646
BQ2448_646 protein.
    
 0.626
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.