STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2792BQ2448_2792 protein. (549 aa)    
Predicted Functional Partners:
BQ2448_2640
BQ2448_2640 protein.
   
 0.999
BQ2448_2644
BQ2448_2644 protein.
   
 0.999
BQ2448_3346
BQ2448_3346 protein.
   
 0.999
BQ2448_6211
BQ2448_6211 protein.
   
 0.999
BQ2448_4022
BQ2448_4022 protein.
   
 0.997
BQ2448_3235
BQ2448_3235 protein.
   
 0.993
BQ2448_7819
BQ2448_7819 protein.
    
 0.976
BQ2448_264
BQ2448_264 protein.
    
 0.969
BQ2448_634
BQ2448_634 protein.
   
 0.961
BQ2448_2283
BQ2448_2283 protein; Belongs to the SKP1 family.
    
  0.925
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.