STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_4094BQ2448_4094 protein. (185 aa)    
Predicted Functional Partners:
BQ2448_7162
BQ2448_7162 protein.
     
 0.676
BQ2448_6462
BQ2448_6462 protein.
    
  0.647
BQ2448_5340
BQ2448_5340 protein.
     
 0.611
BQ2448_320
BQ2448_320 protein.
    
 0.584
BQ2448_3213
BQ2448_3213 protein.
    
 0.570
BQ2448_4519
BQ2448_4519 protein.
     
 0.550
BQ2448_4277
BQ2448_4277 protein.
     
 0.550
BQ2448_4520
BQ2448_4520 protein.
     
 0.550
BQ2448_7631
BQ2448_7631 protein.
     
 0.471
BQ2448_6172
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.434
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.