STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2951BQ2448_2951 protein. (614 aa)    
Predicted Functional Partners:
BQ2448_4906
BQ2448_4906 protein.
    
  0.782
BQ2448_2197
BQ2448_2197 protein.
    
 0.479
BQ2448_3650
BQ2448_3650 protein.
    
 0.479
BQ2448_7068
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.479
BQ2448_2015
BQ2448_2015 protein; Belongs to the cytochrome b5 family.
    
  0.439
BQ2448_604
BQ2448_604 protein.
   
  0.430
BQ2448_4881
BQ2448_4881 protein.
   
  0.430
BQ2448_4262
BQ2448_4262 protein.
   
  0.430
BQ2448_4700
BQ2448_4700 protein.
   
  0.430
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.