STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_4394BQ2448_4394 protein. (496 aa)    
Predicted Functional Partners:
BQ2448_7141
BQ2448_7141 protein.
 
     0.863
BQ2448_7600
BQ2448_7600 protein.
 
     0.563
BQ2448_8072
BQ2448_8072 protein.
    
  0.504
BQ2448_6669
BQ2448_6669 protein.
    
  0.494
BQ2448_7232
BQ2448_7232 protein.
    
  0.479
BQ2448_4596
BQ2448_4596 protein.
    
  0.467
BQ2448_3363
BQ2448_3363 protein.
    
  0.467
BQ2448_7586
BQ2448_7586 protein.
 
     0.448
BQ2448_3418
BQ2448_3418 protein.
 
     0.442
BQ2448_204
BQ2448_204 protein.
 
     0.441
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.