STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3221BQ2448_3221 protein. (363 aa)    
Predicted Functional Partners:
BQ2448_6602
BQ2448_6602 protein.
    
 0.857
BQ2448_7568
BQ2448_7568 protein.
    
 0.839
BQ2448_4276
BQ2448_4276 protein.
    
 0.832
BQ2448_5823
BQ2448_5823 protein.
    
 0.828
BQ2448_7903
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.818
BQ2448_8135
BQ2448_8135 protein.
   
 0.797
BQ2448_7864
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.789
BQ2448_785
BQ2448_785 protein.
    
 0.782
BQ2448_7331
BQ2448_7331 protein.
    
 0.782
BQ2448_1378
Nuclear cap-binding protein subunit 2.
    
 0.781
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.