STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6902BQ2448_6902 protein. (177 aa)    
Predicted Functional Partners:
BQ2448_1499
BQ2448_1499 protein.
   
 0.994
BQ2448_6302
Glutathione synthetase.
   
 0.892
BQ2448_7879
Tryptophan synthase.
    
  0.771
BQ2448_3460
Aspartate aminotransferase.
   
 0.770
BQ2448_5395
Aspartate aminotransferase.
   
  0.769
BQ2448_6456
BQ2448_6456 protein.
    
  0.767
BQ2448_3940
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.759
BQ2448_2441
BQ2448_2441 protein.
   
 
  0.744
BQ2448_1104
BQ2448_1104 protein.
   
 0.654
BQ2448_1326
BQ2448_1326 protein.
   
 0.654
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.