STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_4086BQ2448_4086 protein. (1173 aa)    
Predicted Functional Partners:
BQ2448_5556
BQ2448_5556 protein.
    
 0.688
BQ2448_4815
BQ2448_4815 protein.
    
 0.669
BQ2448_4795
BQ2448_4795 protein.
    
 0.668
BQ2448_7903
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.629
BQ2448_2566
BQ2448_2566 protein.
    
 0.628
BQ2448_7864
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.623
BQ2448_406
BQ2448_406 protein; Belongs to the WD repeat SEC13 family.
    
 0.620
BQ2448_4035
BQ2448_4035 protein; Belongs to the WD repeat SEC13 family.
    
 0.614
BQ2448_1034
BQ2448_1034 protein.
    
 0.603
BQ2448_7819
BQ2448_7819 protein.
    
  0.599
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.