STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6080BQ2448_6080 protein. (567 aa)    
Predicted Functional Partners:
BQ2448_1234
BQ2448_1234 protein.
   
 
 0.937
BQ2448_2706
BQ2448_2706 protein.
   
 
 0.937
BQ2448_264
BQ2448_264 protein.
    
 0.891
BQ2448_3019
BQ2448_3019 protein; Belongs to the cullin family.
    
 0.852
BQ2448_4712
BQ2448_4712 protein.
     
 0.742
BQ2448_6669
BQ2448_6669 protein.
     
 0.713
BQ2448_6661
BQ2448_6661 protein.
     
 0.701
BQ2448_4776
BQ2448_4776 protein.
   
 
  0.679
BQ2448_4022
BQ2448_4022 protein.
   
  0.677
BQ2448_4909
BQ2448_4909 protein.
    
 0.656
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.