STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_4817BQ2448_4817 protein. (671 aa)    
Predicted Functional Partners:
BQ2448_2317
BQ2448_2317 protein.
    
 0.967
BQ2448_5225
BQ2448_5225 protein.
    
 0.787
BQ2448_1298
BQ2448_1298 protein.
    
 0.708
BQ2448_643
DNA ligase.
    
 0.703
BQ2448_1580
BQ2448_1580 protein.
    
 0.703
BQ2448_5413
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.612
BQ2448_5044
BQ2448_5044 protein.
    
 0.612
BQ2448_6469
BQ2448_6469 protein.
    
 0.578
BQ2448_6597
BQ2448_6597 protein.
    
 0.578
BQ2448_7792
DNA ligase.
    
 0.578
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.