STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2794BQ2448_2794 protein. (343 aa)    
Predicted Functional Partners:
BQ2448_2670
BQ2448_2670 protein.
   
 
 0.953
BQ2448_6434
BQ2448_6434 protein.
   
 
 0.953
BQ2448_4030
BQ2448_4030 protein.
   
 
 0.922
BQ2448_4364
BQ2448_4364 protein.
   
 
 0.882
BQ2448_2617
BQ2448_2617 protein.
   
 
 0.829
BQ2448_5186
BQ2448_5186 protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.820
BQ2448_6314
BQ2448_6314 protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.820
BQ2448_3933
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.813
BQ2448_1310
BQ2448_1310 protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.804
BQ2448_2258
BQ2448_2258 protein.
 
      0.796
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.