STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_2854BQ2448_2854 protein. (867 aa)    
Predicted Functional Partners:
BQ2448_5990
BQ2448_5990 protein.
    
 0.691
BQ2448_6729
BQ2448_6729 protein.
    
 0.668
BQ2448_780
DNA polymerase.
   
 0.658
BQ2448_755
Small nuclear ribonucleoprotein Sm D2.
    
 0.627
BQ2448_8088
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.627
BQ2448_702
Small nuclear ribonucleoprotein G.
    
  0.605
BQ2448_6270
BQ2448_6270 protein.
    
 0.601
BQ2448_8071
BQ2448_8071 protein.
    
 0.601
BQ2448_4693
BQ2448_4693 protein.
     
 0.590
BQ2448_5068
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.571
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.