STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3841BQ2448_3841 protein. (850 aa)    
Predicted Functional Partners:
BQ2448_2909
BQ2448_2909 protein.
   
 
 0.992
BQ2448_4150
BQ2448_4150 protein.
    
 
 0.988
BQ2448_2499
BQ2448_2499 protein.
    
 
 0.957
BQ2448_1998
BQ2448_1998 protein.
    
 
 0.949
BQ2448_2447
BQ2448_2447 protein.
   
 
 0.785
BQ2448_2943
BQ2448_2943 protein.
   
 
 0.785
BQ2448_5461
BQ2448_5461 protein.
    
 
 0.734
BQ2448_2182
BQ2448_2182 protein; Belongs to the FBPase class 1 family.
    
 
 0.697
BQ2448_1500
BQ2448_1500 protein.
   
 
 0.670
BQ2448_4514
BQ2448_4514 protein.
    
 
 0.632
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.