STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_4118BQ2448_4118 protein. (239 aa)    
Predicted Functional Partners:
BQ2448_3216
BQ2448_3216 protein.
    
 0.982
BQ2448_4828
BQ2448_4828 protein.
    
 0.958
BQ2448_8054
BQ2448_8054 protein.
    
 0.958
BQ2448_1511
BQ2448_1511 protein.
    
 0.954
BQ2448_6567
BQ2448_6567 protein.
  
  
 
0.893
BQ2448_5825
BQ2448_5825 protein.
    
 0.886
BQ2448_436
BQ2448_436 protein.
    
 0.868
BQ2448_437
BQ2448_437 protein.
    
 0.868
BQ2448_1122
BQ2448_1122 protein.
    
 0.857
BQ2448_263
BQ2448_263 protein.
    
 0.849
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.