STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6147Signal peptidase complex catalytic subunit SEC11. (179 aa)    
Predicted Functional Partners:
BQ2448_7672
BQ2448_7672 protein.
   
 0.988
BQ2448_817
BQ2448_817 protein.
   
 0.984
BQ2448_7159
Signal peptidase subunit 3.
   
 0.983
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.979
BQ2448_6505
BQ2448_6505 protein.
    
 0.822
BQ2448_91
BQ2448_91 protein.
    
 0.809
BQ2448_2362
BQ2448_2362 protein.
    
 0.808
BQ2448_2065
BQ2448_2065 protein.
    
 0.804
BQ2448_3275
BQ2448_3275 protein.
     
 0.798
BQ2448_5567
BQ2448_5567 protein.
   
 0.674
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.