STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6185BQ2448_6185 protein. (432 aa)    
Predicted Functional Partners:
BQ2448_5315
BQ2448_5315 protein.
 
 
 0.987
BQ2448_3249
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.963
BQ2448_6654
BQ2448_6654 protein.
  
 0.959
BQ2448_3281
BQ2448_3281 protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.944
BQ2448_180
BQ2448_180 protein.
  
0.922
BQ2448_3542
BQ2448_3542 protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.915
BQ2448_5576
BQ2448_5576 protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.912
BQ2448_1854
BQ2448_1854 protein.
 
   
  0.898
BQ2448_6151
BQ2448_6151 protein.
 
 0.887
BQ2448_6266
BQ2448_6266 protein.
  
 0.874
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.