STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_8091BQ2448_8091 protein. (121 aa)    
Predicted Functional Partners:
BQ2448_5223
BQ2448_5223 protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.999
BQ2448_4403
BQ2448_4403 protein.
    
 0.998
BQ2448_7768
BQ2448_7768 protein.
   
 0.988
BQ2448_5663
BQ2448_5663 protein.
    
 0.984
BQ2448_167
BQ2448_167 protein.
    
 0.983
BQ2448_6011
BQ2448_6011 protein.
    
 0.981
BQ2448_5068
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.980
BQ2448_7643
BQ2448_7643 protein.
    
 0.972
BQ2448_7025
BQ2448_7025 protein.
    
 0.971
BQ2448_8086
BQ2448_8086 protein.
   
 0.971
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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