STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6906BQ2448_6906 protein. (245 aa)    
Predicted Functional Partners:
BQ2448_4218
BQ2448_4218 protein.
   
 0.916
BQ2448_2486
BQ2448_2486 protein.
  
  
 
0.810
BQ2448_5338
BQ2448_5338 protein.
  
 
 0.783
BQ2448_1098
BQ2448_1098 protein.
  
0.783
BQ2448_3305
BQ2448_3305 protein.
    
 0.776
BQ2448_7722
BQ2448_7722 protein.
  
 0.764
BQ2448_1378
Nuclear cap-binding protein subunit 2.
   
 0.757
BQ2448_7055
BQ2448_7055 protein.
  
 
 0.755
BQ2448_165
BQ2448_165 protein.
   
 0.754
BQ2448_6668
BQ2448_6668 protein.
   
 0.754
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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