STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_7981ATP-dependent DNA helicase; Belongs to the helicase family. (206 aa)    
Predicted Functional Partners:
BQ2448_6958
BQ2448_6958 protein.
 
     0.868
BQ2448_6984
BQ2448_6984 protein.
 
     0.866
BQ2448_7982
ATP-dependent DNA helicase; Belongs to the helicase family.
 
     0.848
BQ2448_207
BQ2448_207 protein.
 
     0.837
BQ2448_6983
BQ2448_6983 protein.
 
     0.816
BQ2448_4956
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.503
BQ2448_4955
BQ2448_4955 protein.
 
     0.494
BQ2448_6993
BQ2448_6993 protein.
   
 
 0.463
BQ2448_2070
BQ2448_2070 protein.
 
     0.450
BQ2448_6967
BQ2448_6967 protein.
 
     0.439
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.