STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_8009BQ2448_8009 protein. (753 aa)    
Predicted Functional Partners:
BQ2448_7948
BQ2448_7948 protein.
 
  
  0.820
BQ2448_3675
BQ2448_3675 protein.
 
  
 0.797
BQ2448_3592
BQ2448_3592 protein.
 
  
 0.792
BQ2448_6754
BQ2448_6754 protein.
    
 0.741
BQ2448_5931
BQ2448_5931 protein.
    
  0.702
BQ2448_5286
BQ2448_5286 protein.
    
  0.702
BQ2448_4118
BQ2448_4118 protein.
    
  0.679
BQ2448_6567
BQ2448_6567 protein.
    
  0.679
BQ2448_7628
BQ2448_7628 protein.
    
  0.679
BQ2448_7819
BQ2448_7819 protein.
    
 0.677
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.