STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_3913BQ2448_3913 protein. (203 aa)    
Predicted Functional Partners:
BQ2448_1392
Serine/threonine-protein phosphatase.
   
 0.998
BQ2448_1079
Peptidylprolyl isomerase.
   
 0.991
BQ2448_5717
BQ2448_5717 protein.
    
 
 0.912
BQ2448_7668
BQ2448_7668 protein.
    
 0.841
BQ2448_4154
BQ2448_4154 protein.
    
 0.840
BQ2448_2242
BQ2448_2242 protein; Belongs to the calmodulin family.
   
0.837
BQ2448_462
BQ2448_462 protein.
    
0.833
BQ2448_4835
BQ2448_4835 protein.
   
 0.832
BQ2448_5654
BQ2448_5654 protein.
    
 0.825
BQ2448_8021
BQ2448_8021 protein.
   
 0.823
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.