STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BQ2448_6565BQ2448_6565 protein. (802 aa)    
Predicted Functional Partners:
BQ2448_1375
BQ2448_1375 protein.
  
 0.805
BQ2448_6073
BQ2448_6073 protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.798
BQ2448_5664
BQ2448_5664 protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.790
BQ2448_4223
BQ2448_4223 protein.
  
 
 0.789
BQ2448_6658
BQ2448_6658 protein.
   
 
 0.789
BQ2448_2544
BQ2448_2544 protein.
   
 
 0.777
BQ2448_4770
BQ2448_4770 protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.775
BQ2448_1000
BQ2448_1000 protein.
  
   0.768
BQ2448_4162
BQ2448_4162 protein.
   
 
 0.758
BQ2448_3613
BQ2448_3613 protein.
   
 
 0.725
Your Current Organism:
Microbotryum intermedium
NCBI taxonomy Id: 269621
Other names: HUV 3895, M. intermedium, Ustilago intermedia
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.